Home / RESEARCH / News RESEARCH

Characterizing pancreatic β-cell heterogeneity in the streptozotocin model by single-cell transcriptomic analysis

Apr.23,2020

Dr. Chengran Xu published a paper in Molecular Metabolism with his collaborators.



Objectives

The streptozotocin (STZ) model is widely used in diabetes research. However, the cellular and molecular states of pancreatic endocrine cells in this model remain unclear. This study aims to explore the molecular characteristics of islet cells treated with STZ and to re-evaluate β-cell dysfunction and regeneration in the STZ model.

Methods

We performed single-cell RNA sequencing of pancreatic endocrine cells from STZ-treated mice. High-quality sequencing data from 2,999 cells were used to identify clusters by Louvain clustering analysis. Principal component analysis (PCA), t-distributed stochastic neighbor embedding (t-SNE), uniform manifold approximation and projection (UMAP), force-directed layout (FDL) and differential expression analysis were performed to define the heterogeneity and transcriptome changes in islet cells. In addition, qPCR and immunofluorescence were used to confirm findings from the sequencing data.

Results

Untreated β-cells were divided into two populations at the transcriptomic level, a large high- Glut2 expression ( Glut2 high ) population and a small low- Glut2 expression ( Glut2 low ) population. At the transcriptomic level, Glut2 low β-cells in adult mice do not represent a developmentally immature state, although a fraction of genes associated with β-cell maturation and function were downregulated in Glut2 low cells. After a single high-dose STZ treatment, most of Glut2 high cells were killed, but Glut2 low cells survived and over time changed to a distinct cell state. We did not observe conversion of Glut2 low to Glut2 high β-cells up to 9 months after STZ treatment. In addition, we did not detect transcriptomic changes in non-β endocrine cells or a direct trans-differentiation pathway from the α-cell lineage to the β-cell lineage in the STZ model.

Conclusions

We identified the heterogeneity of β-cells in both physiological and pathological conditions. However, we did not observe conversion of Glut2 low to Glut2 high β-cells, transcriptomic changes in non-β endocrine cells, or direct trans-differentiation from the α-cell lineage to the β-cell lineage in the STZ model. Our results clearly define the state of islet cells treated with STZ and allow us to re-evaluate the STZ model widely used in diabetes studies.



Original link: http://doi.org/10.1016/j.molmet.2020.100982